Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh8Q7TSK3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Gm6447-201ENSMUST00000118905 835 ntBASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Gm43179-201ENSMUST00000198797 275 ntBASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Gm44069-201ENSMUST00000204898 506 ntBASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Gm18054-201ENSMUST00000207539 555 ntBASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdh8Q7TSK3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Mir1247-201ENSMUST00000116706 82 ntBASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm8805-201ENSMUST00000117848 313 ntBASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm9823-201ENSMUST00000051212 327 ntBASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms