Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx55Q6ZPL9 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Gm13461-201ENSMUST00000120980 662 ntBASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Gm7003-201ENSMUST00000195089 312 ntBASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ddx55Q6ZPL9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm8018-201ENSMUST00000173536 789 ntBASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm44100-201ENSMUST00000204329 436 ntBASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 AC154680.1-201ENSMUST00000224376 859 ntBASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx55Q6ZPL9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms