Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm23119-201ENSMUST00000158610 140 ntBASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Gm10076-201ENSMUST00000073238 384 ntBASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Chd4Q6PDQ2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Gm11331-201ENSMUST00000119764 288 ntBASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Gm14999-201ENSMUST00000121039 624 ntBASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Gm7848-201ENSMUST00000210739 718 ntBASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Chd4Q6PDQ2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Chd4Q6PDQ2 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd4Q6PDQ2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd4Q6PDQ2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd4Q6PDQ2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Chd4Q6PDQ2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Gm27552-201ENSMUST00000183351 62 ntBASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Gm27844-201ENSMUST00000183613 62 ntBASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Gm18393-201ENSMUST00000208349 1131 ntBASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.76■□□□□ 0.27
Chd4Q6PDQ2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Gm17040-202ENSMUST00000170597 889 ntBASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Gm5525-201ENSMUST00000190438 1312 ntBASIC16.75■□□□□ 0.27
Chd4Q6PDQ2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms