Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC19.79■□□□□ 0.76
Slx4Q6P1D7 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Gm7666-201ENSMUST00000146631 819 ntBASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Gm8798-201ENSMUST00000211877 1661 ntBASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Gm19863-201ENSMUST00000192480 2218 ntBASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slx4Q6P1D7 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Gm27530-201ENSMUST00000184096 98 ntBASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Gm42937-201ENSMUST00000197360 752 ntBASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC19.77■□□□□ 0.76
Slx4Q6P1D7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Slx4Q6P1D7 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Slx4Q6P1D7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC19.77■□□□□ 0.75
Slx4Q6P1D7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Gm43962-201ENSMUST00000203898 190 ntBASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Gm6580-201ENSMUST00000117504 1357 ntBASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slx4Q6P1D7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Gm14460-201ENSMUST00000121511 639 ntBASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Gm4797-201ENSMUST00000219075 1283 ntBASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms