Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Gm5687-201ENSMUST00000118252 640 ntBASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Gm2495-201ENSMUST00000191160 466 ntBASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Itm2b-204ENSMUST00000228637 783 ntBASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Sp140Q6NSQ5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Gm11978-201ENSMUST00000122315 466 ntBASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sp140Q6NSQ5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms