Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Col11a2Q64739 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col11a2Q64739 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Col11a2Q64739 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.48■□□□□ 0.07
Col11a2Q64739 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
Col11a2Q64739 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC15.48■□□□□ 0.07
Col11a2Q64739 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.48■□□□□ 0.07
Col11a2Q64739 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.48■□□□□ 0.07
Col11a2Q64739 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Col11a2Q64739 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Col11a2Q64739 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.47■□□□□ 0.07
Col11a2Q64739 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.47■□□□□ 0.07
Col11a2Q64739 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.47■□□□□ 0.07
Col11a2Q64739 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC15.47■□□□□ 0.07
Col11a2Q64739 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.47■□□□□ 0.07
Col11a2Q64739 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC15.47■□□□□ 0.07
Col11a2Q64739 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.47■□□□□ 0.07
Col11a2Q64739 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.47■□□□□ 0.07
Col11a2Q64739 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.47■□□□□ 0.07
Col11a2Q64739 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.47■□□□□ 0.07
Col11a2Q64739 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Col11a2Q64739 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Col11a2Q64739 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.46■□□□□ 0.07
Col11a2Q64739 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.46■□□□□ 0.07
Col11a2Q64739 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 Gm22144-201ENSMUST00000157402 102 ntBASIC15.46■□□□□ 0.07
Col11a2Q64739 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.46■□□□□ 0.07
Col11a2Q64739 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.46■□□□□ 0.07
Col11a2Q64739 Gm45398-201ENSMUST00000210561 165 ntBASIC15.46■□□□□ 0.07
Col11a2Q64739 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC15.46■□□□□ 0.07
Col11a2Q64739 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Col11a2Q64739 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.46■□□□□ 0.07
Col11a2Q64739 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.46■□□□□ 0.07
Col11a2Q64739 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Col11a2Q64739 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.46■□□□□ 0.07
Col11a2Q64739 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Col11a2Q64739 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col11a2Q64739 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.46■□□□□ 0.06
Col11a2Q64739 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col11a2Q64739 Gm16166-201ENSMUST00000118291 787 ntBASIC15.46■□□□□ 0.06
Col11a2Q64739 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col11a2Q64739 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col11a2Q64739 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.46■□□□□ 0.06
Col11a2Q64739 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col11a2Q64739 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC15.46■□□□□ 0.06
Col11a2Q64739 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col11a2Q64739 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col11a2Q64739 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.46■□□□□ 0.06
Col11a2Q64739 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Col11a2Q64739 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col11a2Q64739 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms