Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
VclQ64727 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VclQ64727 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VclQ64727 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VclQ64727 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
VclQ64727 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Gm12203-201ENSMUST00000118235 598 ntBASIC12.89□□□□□ -0.35
VclQ64727 Gm12209-201ENSMUST00000120089 596 ntBASIC12.89□□□□□ -0.35
VclQ64727 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VclQ64727 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.89□□□□□ -0.35
VclQ64727 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.89□□□□□ -0.35
VclQ64727 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.89□□□□□ -0.35
VclQ64727 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.89□□□□□ -0.35
VclQ64727 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VclQ64727 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.89□□□□□ -0.35
VclQ64727 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
VclQ64727 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VclQ64727 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.89□□□□□ -0.35
VclQ64727 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VclQ64727 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VclQ64727 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.88□□□□□ -0.35
VclQ64727 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.88□□□□□ -0.35
VclQ64727 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.88□□□□□ -0.35
VclQ64727 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Gm11425-201ENSMUST00000119608 498 ntBASIC12.88□□□□□ -0.35
VclQ64727 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.88□□□□□ -0.35
VclQ64727 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.88□□□□□ -0.35
VclQ64727 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.88□□□□□ -0.35
VclQ64727 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
VclQ64727 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.88□□□□□ -0.35
VclQ64727 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.88□□□□□ -0.35
VclQ64727 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
VclQ64727 Mir7221-201ENSMUST00000184009 72 ntBASIC12.88□□□□□ -0.35
VclQ64727 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.88□□□□□ -0.35
VclQ64727 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.88□□□□□ -0.35
VclQ64727 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.88□□□□□ -0.35
VclQ64727 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Gm43818-201ENSMUST00000200605 466 ntBASIC12.88□□□□□ -0.35
VclQ64727 Gm29705-201ENSMUST00000212598 474 ntBASIC12.88□□□□□ -0.35
VclQ64727 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.88□□□□□ -0.35
VclQ64727 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.88□□□□□ -0.35
VclQ64727 Gm18041-201ENSMUST00000218210 618 ntBASIC12.88□□□□□ -0.35
VclQ64727 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Gm9396-201ENSMUST00000076703 567 ntBASIC12.88□□□□□ -0.35
VclQ64727 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.88□□□□□ -0.35
VclQ64727 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.88□□□□□ -0.35
VclQ64727 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
VclQ64727 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VclQ64727 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VclQ64727 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms