Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC11.97□□□□□ -0.49
VcanQ62059 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.97□□□□□ -0.49
VcanQ62059 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.97□□□□□ -0.49
VcanQ62059 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.97□□□□□ -0.49
VcanQ62059 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.97□□□□□ -0.49
VcanQ62059 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
VcanQ62059 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VcanQ62059 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VcanQ62059 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.96□□□□□ -0.49
VcanQ62059 Mir6941-201ENSMUST00000184711 59 ntBASIC11.96□□□□□ -0.49
VcanQ62059 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
VcanQ62059 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.96□□□□□ -0.49
VcanQ62059 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.96□□□□□ -0.49
VcanQ62059 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
VcanQ62059 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.96□□□□□ -0.49
VcanQ62059 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.96□□□□□ -0.49
VcanQ62059 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
VcanQ62059 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
VcanQ62059 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.96□□□□□ -0.49
VcanQ62059 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
VcanQ62059 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
VcanQ62059 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VcanQ62059 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.96□□□□□ -0.49
VcanQ62059 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
VcanQ62059 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VcanQ62059 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.96□□□□□ -0.5
VcanQ62059 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
VcanQ62059 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VcanQ62059 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VcanQ62059 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VcanQ62059 Gm12783-201ENSMUST00000121425 397 ntBASIC11.96□□□□□ -0.5
VcanQ62059 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.96□□□□□ -0.5
VcanQ62059 Gm2445-201ENSMUST00000182798 989 ntBASIC11.96□□□□□ -0.5
VcanQ62059 Gm18059-201ENSMUST00000208073 580 ntBASIC11.96□□□□□ -0.5
VcanQ62059 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VcanQ62059 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VcanQ62059 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VcanQ62059 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Gm7851-201ENSMUST00000117574 323 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Gm12501-201ENSMUST00000119163 529 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
VcanQ62059 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
VcanQ62059 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Gm37299-201ENSMUST00000193951 826 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
VcanQ62059 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.95□□□□□ -0.5
VcanQ62059 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
VcanQ62059 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.95□□□□□ -0.5
VcanQ62059 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
VcanQ62059 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC11.95□□□□□ -0.5
VcanQ62059 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.95□□□□□ -0.5
VcanQ62059 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 Gm38092-201ENSMUST00000195600 653 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Gm5100-201ENSMUST00000195631 589 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms