Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox17Q61473 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.27□□□□□ -0.44
Sox17Q61473 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.27□□□□□ -0.44
Sox17Q61473 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox17Q61473 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox17Q61473 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox17Q61473 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.27□□□□□ -0.45
Sox17Q61473 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox17Q61473 Gm15240-201ENSMUST00000118156 720 ntBASIC12.27□□□□□ -0.45
Sox17Q61473 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sox17Q61473 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Sox17Q61473 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox17Q61473 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox17Q61473 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox17Q61473 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox17Q61473 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sox17Q61473 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox17Q61473 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Sox17Q61473 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox17Q61473 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Sox17Q61473 Rubie-203ENSMUST00000227803 2430 ntBASIC12.26□□□□□ -0.45
Sox17Q61473 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox17Q61473 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Gm8410-201ENSMUST00000117225 605 ntBASIC12.26□□□□□ -0.45
Sox17Q61473 Gm15653-201ENSMUST00000119247 907 ntBASIC12.26□□□□□ -0.45
Sox17Q61473 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox17Q61473 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sox17Q61473 Gm24158-201ENSMUST00000175263 71 ntBASIC12.26□□□□□ -0.45
Sox17Q61473 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox17Q61473 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox17Q61473 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox17Q61473 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.26□□□□□ -0.45
Sox17Q61473 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sox17Q61473 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.26□□□□□ -0.45
Sox17Q61473 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox17Q61473 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Sox17Q61473 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.26□□□□□ -0.45
Sox17Q61473 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox17Q61473 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Sox17Q61473 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.25□□□□□ -0.45
Sox17Q61473 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox17Q61473 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms