Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mir181d-201ENSMUST00000102383 72 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm5340-201ENSMUST00000203733 880 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm45527-201ENSMUST00000211052 774 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.6□□□□□ -0.39
Col12a1Q60847 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col12a1Q60847 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Col12a1Q60847 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.59□□□□□ -0.39
Col12a1Q60847 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.59□□□□□ -0.39
Col12a1Q60847 Gm25604-201ENSMUST00000158359 133 ntBASIC12.59□□□□□ -0.39
Col12a1Q60847 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.59□□□□□ -0.39
Col12a1Q60847 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.59□□□□□ -0.39
Col12a1Q60847 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.59□□□□□ -0.39
Col12a1Q60847 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col12a1Q60847 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC12.59□□□□□ -0.39
Col12a1Q60847 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col12a1Q60847 Gm6630-201ENSMUST00000119199 454 ntBASIC12.59□□□□□ -0.39
Col12a1Q60847 Gm4726-201ENSMUST00000135604 736 ntBASIC12.59□□□□□ -0.39
Col12a1Q60847 Gm6019-201ENSMUST00000148369 736 ntBASIC12.59□□□□□ -0.39
Col12a1Q60847 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col12a1Q60847 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col12a1Q60847 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col12a1Q60847 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col12a1Q60847 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Col12a1Q60847 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col12a1Q60847 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.58□□□□□ -0.39
Col12a1Q60847 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Gm12218-201ENSMUST00000117666 399 ntBASIC12.58□□□□□ -0.4
Col12a1Q60847 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col12a1Q60847 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.58□□□□□ -0.4
Col12a1Q60847 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.58□□□□□ -0.4
Col12a1Q60847 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col12a1Q60847 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.58□□□□□ -0.4
Col12a1Q60847 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.58□□□□□ -0.4
Col12a1Q60847 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.58□□□□□ -0.4
Col12a1Q60847 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.58□□□□□ -0.4
Col12a1Q60847 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.58□□□□□ -0.4
Col12a1Q60847 Gm18204-201ENSMUST00000209835 793 ntBASIC12.58□□□□□ -0.4
Col12a1Q60847 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Col12a1Q60847 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col12a1Q60847 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms