Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Bdp1Q571C7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.21□□□□□ -0.3
Bdp1Q571C7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Bdp1Q571C7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm14219-201ENSMUST00000120414 288 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm18204-201ENSMUST00000209835 793 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm270-201ENSMUST00000223010 976 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Mir1956-201ENSMUST00000157748 65 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.2□□□□□ -0.3
Bdp1Q571C7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Bdp1Q571C7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Bdp1Q571C7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Bdp1Q571C7 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bdp1Q571C7 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Bdp1Q571C7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Bdp1Q571C7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Bdp1Q571C7 Gm13492-201ENSMUST00000119772 665 ntBASIC13.19□□□□□ -0.3
Bdp1Q571C7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.19□□□□□ -0.3
Bdp1Q571C7 Gm10731-201ENSMUST00000181171 448 ntBASIC13.19□□□□□ -0.3
Bdp1Q571C7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.19□□□□□ -0.3
Bdp1Q571C7 Gm44329-201ENSMUST00000197469 112 ntBASIC13.19□□□□□ -0.3
Bdp1Q571C7 Gm5298-201ENSMUST00000201122 892 ntBASIC13.19□□□□□ -0.3
Bdp1Q571C7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms