Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Gm12485-201ENSMUST00000119641 291 ntBASIC12.96□□□□□ -0.33
Scn2bQ56A07 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.96□□□□□ -0.33
Scn2bQ56A07 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.96□□□□□ -0.33
Scn2bQ56A07 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.96□□□□□ -0.33
Scn2bQ56A07 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.96□□□□□ -0.33
Scn2bQ56A07 Gm19078-201ENSMUST00000206311 727 ntBASIC12.96□□□□□ -0.33
Scn2bQ56A07 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.96□□□□□ -0.33
Scn2bQ56A07 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn2bQ56A07 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn2bQ56A07 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.96□□□□□ -0.34
Scn2bQ56A07 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Scn2bQ56A07 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scn2bQ56A07 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Scn2bQ56A07 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn2bQ56A07 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn2bQ56A07 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.96□□□□□ -0.34
Scn2bQ56A07 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn2bQ56A07 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.95□□□□□ -0.34
Scn2bQ56A07 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.95□□□□□ -0.34
Scn2bQ56A07 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.95□□□□□ -0.34
Scn2bQ56A07 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.95□□□□□ -0.34
Scn2bQ56A07 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Scn2bQ56A07 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.94□□□□□ -0.34
Scn2bQ56A07 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Scn2bQ56A07 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms