Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdkl5Q3UTQ8 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Gm6458-201ENSMUST00000211573 635 ntBASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Gm17794-201ENSMUST00000220252 955 ntBASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkl5Q3UTQ8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Gm8213-201ENSMUST00000118191 441 ntBASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Gm9794-201ENSMUST00000202370 423 ntBASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Gm5356-201ENSMUST00000093326 615 ntBASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.16■□□□□ 0.02
Cdkl5Q3UTQ8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms