Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nlrc4Q3UP24 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Gm14660-201ENSMUST00000119809 575 ntBASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Gm27682-201ENSMUST00000183930 110 ntBASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nlrc4Q3UP24 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Gm27731-201ENSMUST00000185192 107 ntBASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Gm43818-201ENSMUST00000200605 466 ntBASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Gm40466-201ENSMUST00000212174 422 ntBASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nlrc4Q3UP24 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Mir686-201ENSMUST00000102174 109 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Gm14127-201ENSMUST00000117906 678 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Mir1982-201ENSMUST00000157368 74 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Mir7085-201ENSMUST00000184353 66 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Gm45784-201ENSMUST00000188360 142 ntBASIC13.78□□□□□ -0.2
Nlrc4Q3UP24 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms