Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3b2Q3UJB0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sf3b2Q3UJB0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sf3b2Q3UJB0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sf3b2Q3UJB0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Sf3b2Q3UJB0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Gm14460-201ENSMUST00000121511 639 ntBASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Gm23363-201ENSMUST00000175024 79 ntBASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b2Q3UJB0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Gm15711-201ENSMUST00000118889 535 ntBASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Gm12380-201ENSMUST00000119012 544 ntBASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Gm45598-202ENSMUST00000210719 986 ntBASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b2Q3UJB0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm6039-201ENSMUST00000121667 1250 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm17391-201ENSMUST00000171036 126 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm17889-201ENSMUST00000198410 598 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm43916-201ENSMUST00000205062 967 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Gm5369-201ENSMUST00000217499 588 ntBASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b2Q3UJB0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Gm25880-201ENSMUST00000104331 132 ntBASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sf3b2Q3UJB0 Gm38210-201ENSMUST00000191944 809 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms