Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cops9Q3U898 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cops9Q3U898 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Gm6184-201ENSMUST00000120403 1261 ntBASIC8.93□□□□□ -0.98
Cops9Q3U898 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC8.93□□□□□ -0.98
Cops9Q3U898 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Gm27301-201ENSMUST00000184012 127 ntBASIC8.93□□□□□ -0.98
Cops9Q3U898 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Gm3695-201ENSMUST00000087222 1009 ntBASIC8.93□□□□□ -0.98
Cops9Q3U898 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 BC001981-202ENSMUST00000191393 1545 ntBASIC8.93□□□□□ -0.98
Cops9Q3U898 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cops9Q3U898 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cops9Q3U898 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC8.92□□□□□ -0.98
Cops9Q3U898 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Cops9Q3U898 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Cops9Q3U898 Gm11873-201ENSMUST00000117877 1304 ntBASIC8.92□□□□□ -0.98
Cops9Q3U898 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC8.92□□□□□ -0.98
Cops9Q3U898 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC8.92□□□□□ -0.98
Cops9Q3U898 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cops9Q3U898 Gm15483-201ENSMUST00000120338 456 ntBASIC8.92□□□□□ -0.98
Cops9Q3U898 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms