Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.88□□□□□ -0.35
Q3KNL4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Q3KNL4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.88□□□□□ -0.35
Q3KNL4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.88□□□□□ -0.35
Q3KNL4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.88□□□□□ -0.35
Q3KNL4 Gm29667-201ENSMUST00000190817 490 ntBASIC12.88□□□□□ -0.35
Q3KNL4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.88□□□□□ -0.35
Q3KNL4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.88□□□□□ -0.35
Q3KNL4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Q3KNL4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Q3KNL4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Q3KNL4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Q3KNL4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.87□□□□□ -0.35
Q3KNL4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.87□□□□□ -0.35
Q3KNL4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Q3KNL4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Gm11524-201ENSMUST00000119349 807 ntBASIC12.87□□□□□ -0.35
Q3KNL4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.87□□□□□ -0.35
Q3KNL4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Q3KNL4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Q3KNL4 Gm28760-201ENSMUST00000185995 736 ntBASIC12.87□□□□□ -0.35
Q3KNL4 Gm19931-201ENSMUST00000198920 368 ntBASIC12.87□□□□□ -0.35
Q3KNL4 Gm44872-201ENSMUST00000207864 420 ntBASIC12.87□□□□□ -0.35
Q3KNL4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.87□□□□□ -0.35
Q3KNL4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Q3KNL4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Q3KNL4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Q3KNL4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Q3KNL4 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.87□□□□□ -0.35
Q3KNL4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Q3KNL4 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.86□□□□□ -0.35
Q3KNL4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Q3KNL4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
Q3KNL4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.86□□□□□ -0.35
Q3KNL4 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Q3KNL4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.86□□□□□ -0.35
Q3KNL4 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Gm29608-201ENSMUST00000190444 463 ntBASIC12.86□□□□□ -0.35
Q3KNL4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.86□□□□□ -0.35
Q3KNL4 Gm19078-201ENSMUST00000206311 727 ntBASIC12.86□□□□□ -0.35
Q3KNL4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Q3KNL4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.86□□□□□ -0.35
Q3KNL4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.86□□□□□ -0.35
Q3KNL4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Q3KNL4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms