Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm18782-201ENSMUST00000209023 1399 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm14006-201ENSMUST00000122132 981 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm43726-201ENSMUST00000199110 775 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm23272-201ENSMUST00000104053 129 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm23439-201ENSMUST00000104292 132 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm26174-201ENSMUST00000158415 219 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm44270-201ENSMUST00000203084 1234 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 CT025603.1-201ENSMUST00000224040 448 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 CT009489.1-201ENSMUST00000227740 1893 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Gm42629-201ENSMUST00000199063 1102 ntBASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ush2AQ2QI47 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm21759-201ENSMUST00000178345 1828 ntBASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm10605-202ENSMUST00000183019 3198 ntBASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm6755-201ENSMUST00000100598 864 ntBASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm6740-201ENSMUST00000100617 864 ntBASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Mir705-201ENSMUST00000102058 82 ntBASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm15004-201ENSMUST00000119192 630 ntBASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm14497-201ENSMUST00000119537 580 ntBASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm18626-201ENSMUST00000221512 1409 ntBASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm27528-202ENSMUST00000222916 2012 ntBASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ush2AQ2QI47 Gm9025-201ENSMUST00000122415 1575 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm24844-201ENSMUST00000158679 127 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm5449-201ENSMUST00000081132 357 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm23132-201ENSMUST00000104254 132 ntBASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ush2AQ2QI47 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms