Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gabpb1Q00420 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.31□□□□□ -0.28
Gabpb1Q00420 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.31□□□□□ -0.28
Gabpb1Q00420 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gabpb1Q00420 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.3□□□□□ -0.28
Gabpb1Q00420 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.3□□□□□ -0.28
Gabpb1Q00420 Gm28911-201ENSMUST00000188837 117 ntBASIC13.3□□□□□ -0.28
Gabpb1Q00420 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.3□□□□□ -0.28
Gabpb1Q00420 Gm8463-201ENSMUST00000208573 613 ntBASIC13.3□□□□□ -0.28
Gabpb1Q00420 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.3□□□□□ -0.28
Gabpb1Q00420 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabpb1Q00420 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.29□□□□□ -0.28
Gabpb1Q00420 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.29□□□□□ -0.28
Gabpb1Q00420 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.29□□□□□ -0.28
Gabpb1Q00420 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.29□□□□□ -0.28
Gabpb1Q00420 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.29□□□□□ -0.28
Gabpb1Q00420 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.29□□□□□ -0.28
Gabpb1Q00420 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.29□□□□□ -0.28
Gabpb1Q00420 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabpb1Q00420 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms