Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Npas1P97459 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Npas1P97459 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Npas1P97459 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Npas1P97459 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.98□□□□□ -0.65
Npas1P97459 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.98□□□□□ -0.65
Npas1P97459 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.98□□□□□ -0.65
Npas1P97459 Rprl2-201ENSMUST00000157150 290 ntBASIC10.98□□□□□ -0.65
Npas1P97459 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.98□□□□□ -0.65
Npas1P97459 Gm6916-202ENSMUST00000205523 195 ntBASIC10.98□□□□□ -0.65
Npas1P97459 Gm18049-201ENSMUST00000208909 581 ntBASIC10.98□□□□□ -0.65
Npas1P97459 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Npas1P97459 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.98□□□□□ -0.65
Npas1P97459 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Npas1P97459 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Npas1P97459 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.98□□□□□ -0.65
Npas1P97459 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Npas1P97459 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.97□□□□□ -0.65
Npas1P97459 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.97□□□□□ -0.65
Npas1P97459 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Gm11779-201ENSMUST00000118541 368 ntBASIC10.97□□□□□ -0.65
Npas1P97459 Gm13365-201ENSMUST00000121188 973 ntBASIC10.97□□□□□ -0.65
Npas1P97459 Gm18889-201ENSMUST00000174284 929 ntBASIC10.97□□□□□ -0.65
Npas1P97459 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.97□□□□□ -0.65
Npas1P97459 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.97□□□□□ -0.65
Npas1P97459 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Dupd1-202ENSMUST00000224735 548 ntBASIC10.97□□□□□ -0.65
Npas1P97459 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Npas1P97459 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Npas1P97459 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Npas1P97459 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms