Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-3P97334 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.35■□□□□ 0.21
Nkx2-3P97334 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.35■□□□□ 0.21
Nkx2-3P97334 Gm7857-201ENSMUST00000117957 358 ntBASIC16.35■□□□□ 0.21
Nkx2-3P97334 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Ighv5-7-201ENSMUST00000192302 244 ntBASIC16.35■□□□□ 0.21
Nkx2-3P97334 Gm39404-201ENSMUST00000216350 313 ntBASIC16.35■□□□□ 0.21
Nkx2-3P97334 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.35■□□□□ 0.21
Nkx2-3P97334 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-3P97334 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.34■□□□□ 0.21
Nkx2-3P97334 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-3P97334 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Gm27046-201ENSMUST00000182160 463 ntBASIC16.34■□□□□ 0.21
Nkx2-3P97334 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Gm25007-201ENSMUST00000083808 133 ntBASIC16.34■□□□□ 0.21
Nkx2-3P97334 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.34■□□□□ 0.21
Nkx2-3P97334 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-3P97334 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Nkx2-3P97334 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-3P97334 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Nkx2-3P97334 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Nkx2-3P97334 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.21
Nkx2-3P97334 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-3P97334 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-3P97334 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.33■□□□□ 0.21
Nkx2-3P97334 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Gm8018-201ENSMUST00000173536 789 ntBASIC16.33■□□□□ 0.2
Nkx2-3P97334 Gm3096-201ENSMUST00000185770 364 ntBASIC16.33■□□□□ 0.2
Nkx2-3P97334 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.33■□□□□ 0.2
Nkx2-3P97334 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-3P97334 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms