Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcdP82347 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
SgcdP82347 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcdP82347 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
SgcdP82347 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcdP82347 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.17□□□□□ -0.46
SgcdP82347 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.17□□□□□ -0.46
SgcdP82347 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SgcdP82347 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SgcdP82347 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SgcdP82347 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.17□□□□□ -0.46
SgcdP82347 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcdP82347 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SgcdP82347 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SgcdP82347 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.17□□□□□ -0.46
SgcdP82347 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.17□□□□□ -0.46
SgcdP82347 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcdP82347 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.17□□□□□ -0.46
SgcdP82347 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
SgcdP82347 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SgcdP82347 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SgcdP82347 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcdP82347 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.17□□□□□ -0.46
SgcdP82347 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.17□□□□□ -0.46
SgcdP82347 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.17□□□□□ -0.46
SgcdP82347 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
SgcdP82347 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
SgcdP82347 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SgcdP82347 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SgcdP82347 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.16□□□□□ -0.46
SgcdP82347 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm15487-201ENSMUST00000122373 465 ntBASIC12.16□□□□□ -0.46
SgcdP82347 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SgcdP82347 Gm29310-201ENSMUST00000185468 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21825-201ENSMUST00000185728 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm29109-201ENSMUST00000185895 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21896-201ENSMUST00000186520 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21873-201ENSMUST00000186728 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21794-201ENSMUST00000187056 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21880-201ENSMUST00000187275 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21826-201ENSMUST00000187451 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Gm21198-201ENSMUST00000188393 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Gm21749-201ENSMUST00000189343 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21901-201ENSMUST00000189568 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm29424-201ENSMUST00000189716 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm28599-201ENSMUST00000189838 694 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21867-201ENSMUST00000189917 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm29269-201ENSMUST00000190087 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21722-201ENSMUST00000190153 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm28423-201ENSMUST00000190701 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21899-201ENSMUST00000190745 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21910-201ENSMUST00000191163 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21849-201ENSMUST00000191571 696 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms