Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Gm2423-201ENSMUST00000074863 733 ntBASIC18.1■□□□□ 0.49
Stra8P70278 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stra8P70278 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stra8P70278 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stra8P70278 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Stra8P70278 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stra8P70278 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Stra8P70278 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stra8P70278 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Stra8P70278 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Stra8P70278 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Stra8P70278 Gm27196-201ENSMUST00000184787 2582 ntBASIC18.09■□□□□ 0.49
Stra8P70278 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Stra8P70278 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Stra8P70278 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Stra8P70278 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.09■□□□□ 0.49
Stra8P70278 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC18.09■□□□□ 0.49
Stra8P70278 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC18.09■□□□□ 0.49
Stra8P70278 Gm21854-201ENSMUST00000179901 471 ntBASIC18.09■□□□□ 0.49
Stra8P70278 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Stra8P70278 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Stra8P70278 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Stra8P70278 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Stra8P70278 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Stra8P70278 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Stra8P70278 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Stra8P70278 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.08■□□□□ 0.49
Stra8P70278 Gm43273-201ENSMUST00000199649 2594 ntBASIC18.08■□□□□ 0.49
Stra8P70278 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Stra8P70278 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Stra8P70278 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Stra8P70278 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Stra8P70278 Gm37269-201ENSMUST00000193906 1891 ntBASIC18.08■□□□□ 0.49
Stra8P70278 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC18.08■□□□□ 0.48
Stra8P70278 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.08■□□□□ 0.48
Stra8P70278 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Stra8P70278 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Stra8P70278 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Stra8P70278 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Stra8P70278 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Stra8P70278 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Stra8P70278 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Stra8P70278 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Stra8P70278 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Stra8P70278 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC18.07■□□□□ 0.48
Stra8P70278 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
Stra8P70278 Gm6912-201ENSMUST00000117218 544 ntBASIC18.07■□□□□ 0.48
Stra8P70278 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.07■□□□□ 0.48
Stra8P70278 Gm42612-201ENSMUST00000197986 623 ntBASIC18.07■□□□□ 0.48
Stra8P70278 Gm43170-201ENSMUST00000199827 612 ntBASIC18.07■□□□□ 0.48
Stra8P70278 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.07■□□□□ 0.48
Stra8P70278 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.07■□□□□ 0.48
Stra8P70278 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Stra8P70278 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC18.07■□□□□ 0.48
Stra8P70278 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Stra8P70278 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Stra8P70278 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Stra8P70278 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Stra8P70278 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Stra8P70278 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms