Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.97□□□□□ -0.33
Crnkl1P63154 Gm29541-201ENSMUST00000191351 678 ntBASIC12.97□□□□□ -0.33
Crnkl1P63154 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.97□□□□□ -0.33
Crnkl1P63154 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Crnkl1P63154 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.97□□□□□ -0.33
Crnkl1P63154 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Crnkl1P63154 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Crnkl1P63154 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Crnkl1P63154 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Crnkl1P63154 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.96□□□□□ -0.33
Crnkl1P63154 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Gm6222-201ENSMUST00000120787 396 ntBASIC12.96□□□□□ -0.33
Crnkl1P63154 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Crnkl1P63154 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.96□□□□□ -0.33
Crnkl1P63154 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.96□□□□□ -0.33
Crnkl1P63154 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Crnkl1P63154 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Crnkl1P63154 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Crnkl1P63154 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Crnkl1P63154 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Crnkl1P63154 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Crnkl1P63154 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Crnkl1P63154 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Crnkl1P63154 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Crnkl1P63154 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Crnkl1P63154 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm9719-201ENSMUST00000162765 543 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm25144-201ENSMUST00000179561 110 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm25352-201ENSMUST00000179815 110 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm29310-201ENSMUST00000185468 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21825-201ENSMUST00000185728 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm29109-201ENSMUST00000185895 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21896-201ENSMUST00000186520 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21873-201ENSMUST00000186728 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21794-201ENSMUST00000187056 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21880-201ENSMUST00000187275 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21826-201ENSMUST00000187451 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21198-201ENSMUST00000188393 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21749-201ENSMUST00000189343 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21901-201ENSMUST00000189568 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm29424-201ENSMUST00000189716 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm28599-201ENSMUST00000189838 694 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21867-201ENSMUST00000189917 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm29269-201ENSMUST00000190087 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21722-201ENSMUST00000190153 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm28423-201ENSMUST00000190701 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21899-201ENSMUST00000190745 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21910-201ENSMUST00000191163 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm21849-201ENSMUST00000191571 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm28678-201ENSMUST00000191593 696 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm10576-201ENSMUST00000191927 825 ntBASIC12.95□□□□□ -0.34
Crnkl1P63154 Gm20910-201ENSMUST00000193268 696 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms