Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.56□□□□□ -0.56
Sec61a1P61620 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.56□□□□□ -0.56
Sec61a1P61620 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.56□□□□□ -0.56
Sec61a1P61620 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.56□□□□□ -0.56
Sec61a1P61620 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.56□□□□□ -0.56
Sec61a1P61620 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.56□□□□□ -0.56
Sec61a1P61620 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sec61a1P61620 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sec61a1P61620 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.55□□□□□ -0.56
Sec61a1P61620 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Gm14928-201ENSMUST00000120198 477 ntBASIC11.55□□□□□ -0.56
Sec61a1P61620 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Sec61a1P61620 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.55□□□□□ -0.56
Sec61a1P61620 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.55□□□□□ -0.56
Sec61a1P61620 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sec61a1P61620 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sec61a1P61620 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.55□□□□□ -0.56
Sec61a1P61620 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.55□□□□□ -0.56
Sec61a1P61620 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.55□□□□□ -0.56
Sec61a1P61620 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.55□□□□□ -0.56
Sec61a1P61620 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.55□□□□□ -0.56
Sec61a1P61620 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.55□□□□□ -0.56
Sec61a1P61620 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Sec61a1P61620 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sec61a1P61620 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.54□□□□□ -0.56
Sec61a1P61620 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sec61a1P61620 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sec61a1P61620 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sec61a1P61620 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.54□□□□□ -0.56
Sec61a1P61620 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.54□□□□□ -0.56
Sec61a1P61620 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Sec61a1P61620 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.54□□□□□ -0.56
Sec61a1P61620 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Sec61a1P61620 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.54□□□□□ -0.56
Sec61a1P61620 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sec61a1P61620 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sec61a1P61620 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.54□□□□□ -0.56
Sec61a1P61620 Gm5745-201ENSMUST00000183748 313 ntBASIC11.54□□□□□ -0.56
Sec61a1P61620 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms