Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nphp4P59240 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Nphp4P59240 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
Nphp4P59240 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Nphp4P59240 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.56■□□□□ 0.4
Nphp4P59240 Gm10176-201ENSMUST00000159707 2264 ntBASIC17.56■□□□□ 0.4
Nphp4P59240 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nphp4P59240 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC17.55■□□□□ 0.4
Nphp4P59240 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC17.55■□□□□ 0.4
Nphp4P59240 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nphp4P59240 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Nphp4P59240 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC17.55■□□□□ 0.4
Nphp4P59240 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
Nphp4P59240 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Gm44851-201ENSMUST00000205735 2309 ntBASIC17.55■□□□□ 0.4
Nphp4P59240 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nphp4P59240 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC17.55■□□□□ 0.4
Nphp4P59240 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nphp4P59240 AC161537.1-201ENSMUST00000226199 1015 ntBASIC17.55■□□□□ 0.4
Nphp4P59240 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.55■□□□□ 0.4
Nphp4P59240 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nphp4P59240 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Gm5385-201ENSMUST00000118988 1559 ntBASIC17.54■□□□□ 0.4
Nphp4P59240 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Nphp4P59240 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.54■□□□□ 0.4
Nphp4P59240 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nphp4P59240 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.54■□□□□ 0.4
Nphp4P59240 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nphp4P59240 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC17.54■□□□□ 0.4
Nphp4P59240 Gm14130-201ENSMUST00000118417 987 ntBASIC17.54■□□□□ 0.4
Nphp4P59240 Gm11439-201ENSMUST00000118598 409 ntBASIC17.54■□□□□ 0.4
Nphp4P59240 Gm27023-201ENSMUST00000182372 285 ntBASIC17.54■□□□□ 0.4
Nphp4P59240 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Gm2260-201ENSMUST00000184965 657 ntBASIC17.54■□□□□ 0.4
Nphp4P59240 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.54■□□□□ 0.4
Nphp4P59240 AC154222.2-201ENSMUST00000225848 607 ntBASIC17.54■□□□□ 0.4
Nphp4P59240 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nphp4P59240 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nphp4P59240 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nphp4P59240 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp4P59240 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nphp4P59240 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Nphp4P59240 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp4P59240 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nphp4P59240 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp4P59240 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Nphp4P59240 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp4P59240 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Nphp4P59240 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp4P59240 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp4P59240 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp4P59240 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp4P59240 Gm14017-201ENSMUST00000121934 386 ntBASIC17.53■□□□□ 0.4
Nphp4P59240 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC17.53■□□□□ 0.4
Nphp4P59240 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nphp4P59240 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms