Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.33■□□□□ 0.2
Vps33bP59016 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33bP59016 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33bP59016 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.33■□□□□ 0.2
Vps33bP59016 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.33■□□□□ 0.2
Vps33bP59016 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vps33bP59016 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33bP59016 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33bP59016 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33bP59016 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
Vps33bP59016 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vps33bP59016 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.33■□□□□ 0.2
Vps33bP59016 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33bP59016 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps33bP59016 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Gm22133-201ENSMUST00000102082 109 ntBASIC16.32■□□□□ 0.2
Vps33bP59016 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.32■□□□□ 0.2
Vps33bP59016 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC16.32■□□□□ 0.2
Vps33bP59016 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC16.32■□□□□ 0.2
Vps33bP59016 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC16.32■□□□□ 0.2
Vps33bP59016 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC16.32■□□□□ 0.2
Vps33bP59016 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps33bP59016 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.32■□□□□ 0.2
Vps33bP59016 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps33bP59016 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps33bP59016 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps33bP59016 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps33bP59016 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps33bP59016 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps33bP59016 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.31■□□□□ 0.2
Vps33bP59016 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.31■□□□□ 0.2
Vps33bP59016 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vps33bP59016 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Vps33bP59016 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps33bP59016 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Gm15881-201ENSMUST00000148792 942 ntBASIC16.31■□□□□ 0.2
Vps33bP59016 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Vps33bP59016 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Vps33bP59016 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps33bP59016 CT009713.8-202ENSMUST00000224732 385 ntBASIC16.31■□□□□ 0.2
Vps33bP59016 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vps33bP59016 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps33bP59016 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps33bP59016 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps33bP59016 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Gm14314-201ENSMUST00000118225 1015 ntBASIC16.3■□□□□ 0.2
Vps33bP59016 Gm12501-201ENSMUST00000119163 529 ntBASIC16.3■□□□□ 0.2
Vps33bP59016 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.3■□□□□ 0.2
Vps33bP59016 Gm9358-201ENSMUST00000183067 927 ntBASIC16.3■□□□□ 0.2
Vps33bP59016 Mir7677-201ENSMUST00000184226 67 ntBASIC16.3■□□□□ 0.2
Vps33bP59016 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Gm19994-201ENSMUST00000217086 586 ntBASIC16.3■□□□□ 0.2
Vps33bP59016 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC16.3■□□□□ 0.2
Vps33bP59016 Gm1821-202ENSMUST00000227415 750 ntBASIC16.3■□□□□ 0.2
Vps33bP59016 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps33bP59016 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Vps33bP59016 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps33bP59016 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.3■□□□□ 0.2
Vps33bP59016 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps33bP59016 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps33bP59016 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms