Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tpm1P58771 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Tpm1P58771 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Tpm1P58771 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.61□□□□□ -0.07
Tpm1P58771 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.61□□□□□ -0.07
Tpm1P58771 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.61□□□□□ -0.07
Tpm1P58771 Gm27622-201ENSMUST00000183779 60 ntBASIC14.61□□□□□ -0.07
Tpm1P58771 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Gm19817-201ENSMUST00000199764 2132 ntBASIC14.61□□□□□ -0.07
Tpm1P58771 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Tpm1P58771 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.61□□□□□ -0.07
Tpm1P58771 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.61□□□□□ -0.07
Tpm1P58771 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.61□□□□□ -0.07
Tpm1P58771 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.61□□□□□ -0.07
Tpm1P58771 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.61□□□□□ -0.07
Tpm1P58771 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tpm1P58771 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Tpm1P58771 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Tpm1P58771 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Tpm1P58771 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.6□□□□□ -0.07
Tpm1P58771 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Tpm1P58771 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Tpm1P58771 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Tpm1P58771 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Tpm1P58771 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Tpm1P58771 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tpm1P58771 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Tpm1P58771 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Tpm1P58771 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.59□□□□□ -0.07
Tpm1P58771 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.59□□□□□ -0.07
Tpm1P58771 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Gm25144-201ENSMUST00000179561 110 ntBASIC14.59□□□□□ -0.07
Tpm1P58771 Gm25352-201ENSMUST00000179815 110 ntBASIC14.59□□□□□ -0.07
Tpm1P58771 Gm27533-201ENSMUST00000183800 152 ntBASIC14.59□□□□□ -0.07
Tpm1P58771 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.59□□□□□ -0.07
Tpm1P58771 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Tpm1P58771 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tpm1P58771 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms