Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.13□□□□□ -0.15
Nub1P54729 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Gm11478-201ENSMUST00000117851 599 ntBASIC14.13□□□□□ -0.15
Nub1P54729 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.13□□□□□ -0.15
Nub1P54729 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.13□□□□□ -0.15
Nub1P54729 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Proscos-202ENSMUST00000178990 666 ntBASIC14.13□□□□□ -0.15
Nub1P54729 Gm5745-201ENSMUST00000183748 313 ntBASIC14.13□□□□□ -0.15
Nub1P54729 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.13□□□□□ -0.15
Nub1P54729 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.13□□□□□ -0.15
Nub1P54729 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nub1P54729 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.13□□□□□ -0.15
Nub1P54729 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nub1P54729 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nub1P54729 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Nub1P54729 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Gm8652-201ENSMUST00000181363 964 ntBASIC14.12□□□□□ -0.15
Nub1P54729 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.12□□□□□ -0.15
Nub1P54729 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.12□□□□□ -0.15
Nub1P54729 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.12□□□□□ -0.15
Nub1P54729 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Gm10012-201ENSMUST00000078252 192 ntBASIC14.12□□□□□ -0.15
Nub1P54729 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nub1P54729 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nub1P54729 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nub1P54729 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.11□□□□□ -0.15
Nub1P54729 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nub1P54729 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.11□□□□□ -0.15
Nub1P54729 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.11□□□□□ -0.15
Nub1P54729 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nub1P54729 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.11□□□□□ -0.15
Nub1P54729 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.11□□□□□ -0.15
Nub1P54729 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.11□□□□□ -0.15
Nub1P54729 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nub1P54729 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.11□□□□□ -0.15
Nub1P54729 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.11□□□□□ -0.15
Nub1P54729 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nub1P54729 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Nub1P54729 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.1□□□□□ -0.15
Nub1P54729 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC14.1□□□□□ -0.15
Nub1P54729 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nub1P54729 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms