Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Pdx1P52946 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Pdx1P52946 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.96□□□□□ -0.33
Pdx1P52946 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Pdx1P52946 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.96□□□□□ -0.33
Pdx1P52946 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.96□□□□□ -0.33
Pdx1P52946 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Pdx1P52946 Gm13123-201ENSMUST00000122173 492 ntBASIC12.96□□□□□ -0.33
Pdx1P52946 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.96□□□□□ -0.33
Pdx1P52946 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Pdx1P52946 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.96□□□□□ -0.33
Pdx1P52946 Gm7561-201ENSMUST00000211203 886 ntBASIC12.96□□□□□ -0.33
Pdx1P52946 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pdx1P52946 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.96□□□□□ -0.33
Pdx1P52946 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdx1P52946 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pdx1P52946 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Pdx1P52946 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdx1P52946 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdx1P52946 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pdx1P52946 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pdx1P52946 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pdx1P52946 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pdx1P52946 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.95□□□□□ -0.34
Pdx1P52946 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.95□□□□□ -0.34
Pdx1P52946 Gm8805-201ENSMUST00000117848 313 ntBASIC12.95□□□□□ -0.34
Pdx1P52946 Gm13369-201ENSMUST00000119442 987 ntBASIC12.95□□□□□ -0.34
Pdx1P52946 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.95□□□□□ -0.34
Pdx1P52946 Gm22331-201ENSMUST00000158066 136 ntBASIC12.95□□□□□ -0.34
Pdx1P52946 Gm8602-201ENSMUST00000184045 607 ntBASIC12.95□□□□□ -0.34
Pdx1P52946 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Pdx1P52946 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Gm6091-201ENSMUST00000098307 165 ntBASIC12.95□□□□□ -0.34
Pdx1P52946 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pdx1P52946 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pdx1P52946 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pdx1P52946 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Pdx1P52946 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pdx1P52946 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pdx1P52946 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pdx1P52946 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.94□□□□□ -0.34
Pdx1P52946 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.94□□□□□ -0.34
Pdx1P52946 Gm27847-201ENSMUST00000183711 107 ntBASIC12.94□□□□□ -0.34
Pdx1P52946 Gm27375-201ENSMUST00000183799 107 ntBASIC12.94□□□□□ -0.34
Pdx1P52946 Gm6458-201ENSMUST00000211573 635 ntBASIC12.94□□□□□ -0.34
Pdx1P52946 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.94□□□□□ -0.34
Pdx1P52946 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Pdx1P52946 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Pdx1P52946 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.94□□□□□ -0.34
Pdx1P52946 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pdx1P52946 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Pdx1P52946 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.94□□□□□ -0.34
Pdx1P52946 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms