Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.4□□□□□ -0.26
ClgnP52194 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClgnP52194 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.4□□□□□ -0.26
ClgnP52194 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClgnP52194 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClgnP52194 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ClgnP52194 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ClgnP52194 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
ClgnP52194 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
ClgnP52194 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.39□□□□□ -0.27
ClgnP52194 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
ClgnP52194 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ClgnP52194 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ClgnP52194 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Gm38223-201ENSMUST00000194484 695 ntBASIC13.39□□□□□ -0.27
ClgnP52194 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.39□□□□□ -0.27
ClgnP52194 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.39□□□□□ -0.27
ClgnP52194 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.39□□□□□ -0.27
ClgnP52194 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.39□□□□□ -0.27
ClgnP52194 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ClgnP52194 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ClgnP52194 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.39□□□□□ -0.27
ClgnP52194 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ClgnP52194 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.39□□□□□ -0.27
ClgnP52194 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ClgnP52194 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ClgnP52194 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
ClgnP52194 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.38□□□□□ -0.27
ClgnP52194 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.38□□□□□ -0.27
ClgnP52194 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.38□□□□□ -0.27
ClgnP52194 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.38□□□□□ -0.27
ClgnP52194 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ClgnP52194 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.38□□□□□ -0.27
ClgnP52194 Gm37917-201ENSMUST00000194711 392 ntBASIC13.38□□□□□ -0.27
ClgnP52194 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.38□□□□□ -0.27
ClgnP52194 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.38□□□□□ -0.27
ClgnP52194 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ClgnP52194 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
ClgnP52194 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ClgnP52194 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClgnP52194 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClgnP52194 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
ClgnP52194 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClgnP52194 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ClgnP52194 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClgnP52194 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClgnP52194 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClgnP52194 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ClgnP52194 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClgnP52194 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ClgnP52194 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.37□□□□□ -0.27
ClgnP52194 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms