Protein–RNA interactions for Protein: P51642

Cntf, Ciliary neurotrophic factor, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfP51642 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
CntfP51642 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CntfP51642 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Gm12485-201ENSMUST00000119641 291 ntBASIC12.29□□□□□ -0.44
CntfP51642 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.29□□□□□ -0.44
CntfP51642 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CntfP51642 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Gm29667-201ENSMUST00000190817 490 ntBASIC12.29□□□□□ -0.44
CntfP51642 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.29□□□□□ -0.44
CntfP51642 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.29□□□□□ -0.44
CntfP51642 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.29□□□□□ -0.44
CntfP51642 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.29□□□□□ -0.44
CntfP51642 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CntfP51642 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CntfP51642 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CntfP51642 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CntfP51642 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CntfP51642 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.29□□□□□ -0.44
CntfP51642 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CntfP51642 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CntfP51642 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CntfP51642 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CntfP51642 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.28□□□□□ -0.44
CntfP51642 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
CntfP51642 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CntfP51642 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CntfP51642 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm12403-201ENSMUST00000121384 959 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.28□□□□□ -0.44
CntfP51642 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.28□□□□□ -0.44
CntfP51642 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm5279-201ENSMUST00000199575 745 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.28□□□□□ -0.44
CntfP51642 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.28□□□□□ -0.44
CntfP51642 Gm9797-201ENSMUST00000052902 613 ntBASIC12.28□□□□□ -0.44
CntfP51642 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CntfP51642 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CntfP51642 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.28□□□□□ -0.44
CntfP51642 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.28□□□□□ -0.44
CntfP51642 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
CntfP51642 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CntfP51642 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.27□□□□□ -0.44
CntfP51642 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms