Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Shmt1P50431 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Shmt1P50431 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Shmt1P50431 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Shmt1P50431 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.84□□□□□ -0.19
Shmt1P50431 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.84□□□□□ -0.19
Shmt1P50431 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
Shmt1P50431 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Shmt1P50431 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.84□□□□□ -0.19
Shmt1P50431 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Shmt1P50431 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.84□□□□□ -0.19
Shmt1P50431 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Shmt1P50431 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Shmt1P50431 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Shmt1P50431 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.83□□□□□ -0.19
Shmt1P50431 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shmt1P50431 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Shmt1P50431 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Shmt1P50431 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shmt1P50431 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Mir874-201ENSMUST00000104769 76 ntBASIC13.83□□□□□ -0.2
Shmt1P50431 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Shmt1P50431 Gm11637-201ENSMUST00000120601 592 ntBASIC13.83□□□□□ -0.2
Shmt1P50431 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.83□□□□□ -0.2
Shmt1P50431 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Gm5370-201ENSMUST00000187187 574 ntBASIC13.83□□□□□ -0.2
Shmt1P50431 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.83□□□□□ -0.2
Shmt1P50431 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.83□□□□□ -0.2
Shmt1P50431 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.83□□□□□ -0.2
Shmt1P50431 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.83□□□□□ -0.2
Shmt1P50431 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.83□□□□□ -0.2
Shmt1P50431 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Shmt1P50431 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Shmt1P50431 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Shmt1P50431 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shmt1P50431 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.82□□□□□ -0.2
Shmt1P50431 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Gm22018-201ENSMUST00000104357 131 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.82□□□□□ -0.2
Shmt1P50431 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 Gm25261-201ENSMUST00000157416 134 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 Gm26185-201ENSMUST00000157692 266 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.82□□□□□ -0.2
Shmt1P50431 Gm6222-202ENSMUST00000182143 629 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Gm19931-201ENSMUST00000198920 368 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shmt1P50431 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.82□□□□□ -0.2
Shmt1P50431 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.82□□□□□ -0.2
Shmt1P50431 Snora73a-201ENSMUST00000082453 205 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms