Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Ercc3P49135 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ercc3P49135 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ercc3P49135 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.56■□□□□ 0.08
Ercc3P49135 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ercc3P49135 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Gm24644-201ENSMUST00000157114 139 ntBASIC15.56■□□□□ 0.08
Ercc3P49135 Gm27331-201ENSMUST00000183705 60 ntBASIC15.56■□□□□ 0.08
Ercc3P49135 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.56■□□□□ 0.08
Ercc3P49135 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.56■□□□□ 0.08
Ercc3P49135 Gm44069-201ENSMUST00000204898 506 ntBASIC15.56■□□□□ 0.08
Ercc3P49135 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.56■□□□□ 0.08
Ercc3P49135 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.56■□□□□ 0.08
Ercc3P49135 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.56■□□□□ 0.08
Ercc3P49135 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.56■□□□□ 0.08
Ercc3P49135 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.56■□□□□ 0.08
Ercc3P49135 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
Ercc3P49135 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.56■□□□□ 0.08
Ercc3P49135 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ercc3P49135 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ercc3P49135 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ercc3P49135 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ercc3P49135 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ercc3P49135 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.55■□□□□ 0.08
Ercc3P49135 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ercc3P49135 Gm16202-201ENSMUST00000117532 544 ntBASIC15.55■□□□□ 0.08
Ercc3P49135 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.55■□□□□ 0.08
Ercc3P49135 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.55■□□□□ 0.08
Ercc3P49135 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.55■□□□□ 0.08
Ercc3P49135 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.55■□□□□ 0.08
Ercc3P49135 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.55■□□□□ 0.08
Ercc3P49135 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.55■□□□□ 0.08
Ercc3P49135 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.55■□□□□ 0.08
Ercc3P49135 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ercc3P49135 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.54■□□□□ 0.08
Ercc3P49135 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
Ercc3P49135 Mir7085-201ENSMUST00000184353 66 ntBASIC15.54■□□□□ 0.08
Ercc3P49135 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.54■□□□□ 0.08
Ercc3P49135 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.54■□□□□ 0.08
Ercc3P49135 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.54■□□□□ 0.08
Ercc3P49135 Gm29705-201ENSMUST00000212598 474 ntBASIC15.54■□□□□ 0.08
Ercc3P49135 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ercc3P49135 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms