Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.28□□□□□ -0.44
Sox2P48432 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sox2P48432 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sox2P48432 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.28□□□□□ -0.44
Sox2P48432 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Sox2P48432 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox2P48432 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox2P48432 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Sox2P48432 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox2P48432 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sox2P48432 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.27□□□□□ -0.45
Sox2P48432 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.27□□□□□ -0.45
Sox2P48432 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.27□□□□□ -0.45
Sox2P48432 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Sox2P48432 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox2P48432 Gm38294-201ENSMUST00000192831 381 ntBASIC12.27□□□□□ -0.45
Sox2P48432 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Gm19931-201ENSMUST00000198920 368 ntBASIC12.27□□□□□ -0.45
Sox2P48432 Gm44344-201ENSMUST00000200287 129 ntBASIC12.27□□□□□ -0.45
Sox2P48432 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.27□□□□□ -0.45
Sox2P48432 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Sox2P48432 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox2P48432 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sox2P48432 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox2P48432 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.27□□□□□ -0.45
Sox2P48432 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sox2P48432 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.26□□□□□ -0.45
Sox2P48432 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox2P48432 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.26□□□□□ -0.45
Sox2P48432 Gm11594-201ENSMUST00000122313 162 ntBASIC12.26□□□□□ -0.45
Sox2P48432 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox2P48432 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.26□□□□□ -0.45
Sox2P48432 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.26□□□□□ -0.45
Sox2P48432 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox2P48432 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.26□□□□□ -0.45
Sox2P48432 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.26□□□□□ -0.45
Sox2P48432 Gm5312-201ENSMUST00000203728 547 ntBASIC12.26□□□□□ -0.45
Sox2P48432 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.26□□□□□ -0.45
Sox2P48432 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.26□□□□□ -0.45
Sox2P48432 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.26□□□□□ -0.45
Sox2P48432 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sox2P48432 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sox2P48432 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sox2P48432 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms