Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps4bP46467 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps4bP46467 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Vps4bP46467 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps4bP46467 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Vps4bP46467 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.31□□□□□ -0.28
Vps4bP46467 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps4bP46467 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps4bP46467 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps4bP46467 Gm38223-201ENSMUST00000194484 695 ntBASIC13.31□□□□□ -0.28
Vps4bP46467 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.31□□□□□ -0.28
Vps4bP46467 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vps4bP46467 Gm19220-201ENSMUST00000222682 803 ntBASIC13.31□□□□□ -0.28
Vps4bP46467 Gm25857-201ENSMUST00000082788 129 ntBASIC13.31□□□□□ -0.28
Vps4bP46467 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.31□□□□□ -0.28
Vps4bP46467 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vps4bP46467 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps4bP46467 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.3□□□□□ -0.28
Vps4bP46467 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Vps4bP46467 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Gm15371-201ENSMUST00000117057 784 ntBASIC13.3□□□□□ -0.28
Vps4bP46467 Gm12859-201ENSMUST00000117834 427 ntBASIC13.3□□□□□ -0.28
Vps4bP46467 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.3□□□□□ -0.28
Vps4bP46467 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps4bP46467 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Gm8515-201ENSMUST00000194852 576 ntBASIC13.3□□□□□ -0.28
Vps4bP46467 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.3□□□□□ -0.28
Vps4bP46467 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.3□□□□□ -0.28
Vps4bP46467 Gm26315-201ENSMUST00000083890 321 ntBASIC13.3□□□□□ -0.28
Vps4bP46467 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps4bP46467 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps4bP46467 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps4bP46467 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.29□□□□□ -0.28
Vps4bP46467 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Vps4bP46467 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.29□□□□□ -0.28
Vps4bP46467 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vps4bP46467 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.29□□□□□ -0.28
Vps4bP46467 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms