Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Cdx2P43241 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdx2P43241 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cdx2P43241 Gm13492-201ENSMUST00000119772 665 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 Gm12566-201ENSMUST00000121479 359 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Cdx2P43241 Gm26361-201ENSMUST00000158868 186 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdx2P43241 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdx2P43241 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 Gm3096-201ENSMUST00000185770 364 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdx2P43241 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdx2P43241 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.4□□□□□ -0.42
Cdx2P43241 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cdx2P43241 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdx2P43241 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx2P43241 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx2P43241 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdx2P43241 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.39□□□□□ -0.43
Cdx2P43241 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Gm7857-201ENSMUST00000117957 358 ntBASIC12.39□□□□□ -0.43
Cdx2P43241 Gm14109-201ENSMUST00000118814 309 ntBASIC12.39□□□□□ -0.43
Cdx2P43241 Gm14208-201ENSMUST00000119645 678 ntBASIC12.39□□□□□ -0.43
Cdx2P43241 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.39□□□□□ -0.43
Cdx2P43241 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdx2P43241 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdx2P43241 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Cdx2P43241 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdx2P43241 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdx2P43241 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdx2P43241 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdx2P43241 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdx2P43241 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.38□□□□□ -0.43
Cdx2P43241 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdx2P43241 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Cdx2P43241 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms