Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Gm28323-201ENSMUST00000186817 2499 ntBASIC8.82□□□□□ -1
Rpl28P41105 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Gm37472-201ENSMUST00000192342 4052 ntBASIC8.82□□□□□ -1
Rpl28P41105 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 AC114543.1-201ENSMUST00000226451 1558 ntBASIC8.82□□□□□ -1
Rpl28P41105 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 AC122840.1-201ENSMUST00000220915 3334 ntBASIC8.82□□□□□ -1
Rpl28P41105 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Rpl28P41105 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Rpl28P41105 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC8.81□□□□□ -1
Rpl28P41105 Gm22175-201ENSMUST00000175007 78 ntBASIC8.81□□□□□ -1
Rpl28P41105 Gm25948-201ENSMUST00000175334 112 ntBASIC8.81□□□□□ -1
Rpl28P41105 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC8.81□□□□□ -1
Rpl28P41105 Gm6916-202ENSMUST00000205523 195 ntBASIC8.81□□□□□ -1
Rpl28P41105 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC8.81□□□□□ -1
Rpl28P41105 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Rpl28P41105 Gm9229-201ENSMUST00000222777 126 ntBASIC8.81□□□□□ -1
Rpl28P41105 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC8.81□□□□□ -1
Rpl28P41105 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
Rpl28P41105 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Tmed9-203ENSMUST00000224741 1450 ntBASIC8.81□□□□□ -1
Rpl28P41105 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC8.81□□□□□ -1
Rpl28P41105 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 CT009757.3-201ENSMUST00000223367 2320 ntBASIC8.81□□□□□ -1
Rpl28P41105 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Rpl28P41105 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC8.81□□□□□ -1
Rpl28P41105 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Rpl28P41105 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Rpl28P41105 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl28P41105 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms