Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Sox6P40645 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox6P40645 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox6P40645 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Sox6P40645 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox6P40645 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.31□□□□□ -0.44
Sox6P40645 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Gm27772-201ENSMUST00000184900 187 ntBASIC12.31□□□□□ -0.44
Sox6P40645 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.31□□□□□ -0.44
Sox6P40645 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox6P40645 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.31□□□□□ -0.44
Sox6P40645 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.3□□□□□ -0.44
Sox6P40645 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.3□□□□□ -0.44
Sox6P40645 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox6P40645 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.3□□□□□ -0.44
Sox6P40645 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sox6P40645 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.3□□□□□ -0.44
Sox6P40645 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox6P40645 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sox6P40645 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sox6P40645 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sox6P40645 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Gm15240-201ENSMUST00000118156 720 ntBASIC12.3□□□□□ -0.44
Sox6P40645 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Sox6P40645 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox6P40645 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.3□□□□□ -0.44
Sox6P40645 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sox6P40645 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox6P40645 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox6P40645 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox6P40645 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox6P40645 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox6P40645 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sox6P40645 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox6P40645 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox6P40645 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox6P40645 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms