Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC16.91■□□□□ 0.3
Col18a1P39061 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col18a1P39061 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col18a1P39061 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC16.91■□□□□ 0.3
Col18a1P39061 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col18a1P39061 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col18a1P39061 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col18a1P39061 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col18a1P39061 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col18a1P39061 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.91■□□□□ 0.3
Col18a1P39061 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC16.91■□□□□ 0.3
Col18a1P39061 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC16.91■□□□□ 0.3
Col18a1P39061 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col18a1P39061 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col18a1P39061 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col18a1P39061 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.91■□□□□ 0.3
Col18a1P39061 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.9■□□□□ 0.3
Col18a1P39061 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC16.9■□□□□ 0.3
Col18a1P39061 Gm12856-201ENSMUST00000119471 1293 ntBASIC16.9■□□□□ 0.3
Col18a1P39061 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC16.9■□□□□ 0.3
Col18a1P39061 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Gm38228-201ENSMUST00000193169 1293 ntBASIC16.9■□□□□ 0.3
Col18a1P39061 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Gm9797-202ENSMUST00000218003 294 ntBASIC16.9■□□□□ 0.3
Col18a1P39061 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.9■□□□□ 0.3
Col18a1P39061 Gm25201-201ENSMUST00000083093 170 ntBASIC16.9■□□□□ 0.3
Col18a1P39061 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col18a1P39061 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.9■□□□□ 0.3
Col18a1P39061 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.9■□□□□ 0.3
Col18a1P39061 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Col18a1P39061 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC16.9■□□□□ 0.3
Col18a1P39061 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col18a1P39061 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col18a1P39061 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col18a1P39061 Gm11949-201ENSMUST00000117640 372 ntBASIC16.89■□□□□ 0.3
Col18a1P39061 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.89■□□□□ 0.3
Col18a1P39061 Gm11422-201ENSMUST00000118925 1103 ntBASIC16.89■□□□□ 0.3
Col18a1P39061 Gm8737-201ENSMUST00000122208 642 ntBASIC16.89■□□□□ 0.3
Col18a1P39061 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.89■□□□□ 0.3
Col18a1P39061 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC16.89■□□□□ 0.3
Col18a1P39061 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col18a1P39061 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Col18a1P39061 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC16.89■□□□□ 0.29
Col18a1P39061 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Gm11511-201ENSMUST00000118146 540 ntBASIC16.89■□□□□ 0.29
Col18a1P39061 Gm13328-201ENSMUST00000120816 1020 ntBASIC16.89■□□□□ 0.29
Col18a1P39061 n-R5s84-201ENSMUST00000122591 109 ntBASIC16.89■□□□□ 0.29
Col18a1P39061 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC16.89■□□□□ 0.29
Col18a1P39061 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC16.89■□□□□ 0.29
Col18a1P39061 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC16.89■□□□□ 0.29
Col18a1P39061 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC16.89■□□□□ 0.29
Col18a1P39061 Gm17877-201ENSMUST00000192578 814 ntBASIC16.89■□□□□ 0.29
Col18a1P39061 Ighv5-11-201ENSMUST00000193354 371 ntBASIC16.89■□□□□ 0.29
Col18a1P39061 CT485606.1-201ENSMUST00000213187 878 ntBASIC16.89■□□□□ 0.29
Col18a1P39061 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC16.89■□□□□ 0.29
Col18a1P39061 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC16.89■□□□□ 0.29
Col18a1P39061 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col18a1P39061 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Col18a1P39061 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col18a1P39061 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col18a1P39061 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Col18a1P39061 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Col18a1P39061 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col18a1P39061 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Col18a1P39061 Gm15784-201ENSMUST00000120260 1462 ntBASIC16.88■□□□□ 0.29
Col18a1P39061 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col18a1P39061 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col18a1P39061 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col18a1P39061 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col18a1P39061 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col18a1P39061 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC16.88■□□□□ 0.29
Col18a1P39061 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col18a1P39061 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col18a1P39061 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms