Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm26315-201ENSMUST00000083890 321 ntBASIC14.3□□□□□ -0.12
Sox5P35710 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sox5P35710 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox5P35710 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox5P35710 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox5P35710 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Sox5P35710 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox5P35710 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.3□□□□□ -0.12
Sox5P35710 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox5P35710 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.29□□□□□ -0.12
Sox5P35710 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Sox5P35710 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox5P35710 Gm27838-201ENSMUST00000184829 128 ntBASIC14.29□□□□□ -0.12
Sox5P35710 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Gm42550-201ENSMUST00000201553 960 ntBASIC14.29□□□□□ -0.12
Sox5P35710 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.29□□□□□ -0.12
Sox5P35710 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox5P35710 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox5P35710 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.29□□□□□ -0.12
Sox5P35710 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox5P35710 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sox5P35710 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox5P35710 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Sox5P35710 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.28□□□□□ -0.12
Sox5P35710 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox5P35710 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox5P35710 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Sox5P35710 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.27□□□□□ -0.12
Sox5P35710 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sox5P35710 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox5P35710 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox5P35710 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sox5P35710 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox5P35710 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sox5P35710 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox5P35710 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox5P35710 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox5P35710 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.27□□□□□ -0.12
Sox5P35710 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sox5P35710 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox5P35710 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox5P35710 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox5P35710 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox5P35710 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox5P35710 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.27□□□□□ -0.13
Sox5P35710 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.27□□□□□ -0.13
Sox5P35710 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms