Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.08□□□□□ -0.48
Sftpa1P35242 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.08□□□□□ -0.48
Sftpa1P35242 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.08□□□□□ -0.48
Sftpa1P35242 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.08□□□□□ -0.48
Sftpa1P35242 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sftpa1P35242 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.07□□□□□ -0.48
Sftpa1P35242 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Sftpa1P35242 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Gm11331-201ENSMUST00000119764 288 ntBASIC12.07□□□□□ -0.48
Sftpa1P35242 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sftpa1P35242 Gm20426-201ENSMUST00000173657 440 ntBASIC12.07□□□□□ -0.48
Sftpa1P35242 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.07□□□□□ -0.48
Sftpa1P35242 Gm27046-201ENSMUST00000182160 463 ntBASIC12.07□□□□□ -0.48
Sftpa1P35242 Mir7032-201ENSMUST00000185154 79 ntBASIC12.07□□□□□ -0.48
Sftpa1P35242 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sftpa1P35242 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.07□□□□□ -0.48
Sftpa1P35242 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.07□□□□□ -0.48
Sftpa1P35242 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.07□□□□□ -0.48
Sftpa1P35242 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.07□□□□□ -0.48
Sftpa1P35242 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sftpa1P35242 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sftpa1P35242 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.06□□□□□ -0.48
Sftpa1P35242 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Sftpa1P35242 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Sftpa1P35242 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Gm23200-201ENSMUST00000104379 132 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sftpa1P35242 Gm9083-201ENSMUST00000120423 819 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Gm13665-201ENSMUST00000120830 528 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.06□□□□□ -0.48
Sftpa1P35242 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Gm25700-201ENSMUST00000177693 110 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.06□□□□□ -0.48
Sftpa1P35242 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sftpa1P35242 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms