Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.98□□□□□ -0.17
Mmp3P28862 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Gm10434-201ENSMUST00000101158 471 ntBASIC13.98□□□□□ -0.17
Mmp3P28862 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Gm11964-201ENSMUST00000120982 444 ntBASIC13.98□□□□□ -0.17
Mmp3P28862 Gm14381-201ENSMUST00000122105 414 ntBASIC13.98□□□□□ -0.17
Mmp3P28862 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.98□□□□□ -0.17
Mmp3P28862 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.98□□□□□ -0.17
Mmp3P28862 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.98□□□□□ -0.17
Mmp3P28862 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.98□□□□□ -0.17
Mmp3P28862 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Mmp3P28862 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
Mmp3P28862 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Mmp3P28862 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Mmp3P28862 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.97□□□□□ -0.17
Mmp3P28862 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.97□□□□□ -0.17
Mmp3P28862 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Mmp3P28862 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Mmp3P28862 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.96□□□□□ -0.17
Mmp3P28862 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Mmp3P28862 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.96□□□□□ -0.17
Mmp3P28862 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Mmp3P28862 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Mmp3P28862 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Mmp3P28862 Gm23363-201ENSMUST00000175024 79 ntBASIC13.96□□□□□ -0.17
Mmp3P28862 Gm27320-201ENSMUST00000184892 109 ntBASIC13.96□□□□□ -0.17
Mmp3P28862 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.96□□□□□ -0.17
Mmp3P28862 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.96□□□□□ -0.17
Mmp3P28862 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Mmp3P28862 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Mmp3P28862 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.96□□□□□ -0.17
Mmp3P28862 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms