Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col2a1P28481 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.67□□□□□ -0.06
Col2a1P28481 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.67□□□□□ -0.06
Col2a1P28481 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.66□□□□□ -0.06
Col2a1P28481 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.66□□□□□ -0.06
Col2a1P28481 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Rprl1-202ENSMUST00000198476 238 ntBASIC14.66□□□□□ -0.06
Col2a1P28481 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.66□□□□□ -0.06
Col2a1P28481 Gm10076-201ENSMUST00000073238 384 ntBASIC14.66□□□□□ -0.06
Col2a1P28481 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.66□□□□□ -0.06
Col2a1P28481 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.66□□□□□ -0.06
Col2a1P28481 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.66□□□□□ -0.06
Col2a1P28481 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col2a1P28481 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col2a1P28481 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col2a1P28481 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC14.65□□□□□ -0.06
Col2a1P28481 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Col2a1P28481 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.65□□□□□ -0.06
Col2a1P28481 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.65□□□□□ -0.06
Col2a1P28481 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col2a1P28481 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col2a1P28481 Gm28882-201ENSMUST00000185504 314 ntBASIC14.65□□□□□ -0.06
Col2a1P28481 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.65□□□□□ -0.06
Col2a1P28481 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Col2a1P28481 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Col2a1P28481 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col2a1P28481 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col2a1P28481 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.65□□□□□ -0.06
Col2a1P28481 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col2a1P28481 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.65□□□□□ -0.06
Col2a1P28481 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Col2a1P28481 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col2a1P28481 Gm7857-201ENSMUST00000117957 358 ntBASIC14.64□□□□□ -0.07
Col2a1P28481 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.64□□□□□ -0.07
Col2a1P28481 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.64□□□□□ -0.07
Col2a1P28481 Gm16570-201ENSMUST00000161951 436 ntBASIC14.64□□□□□ -0.07
Col2a1P28481 Gm25700-201ENSMUST00000177693 110 ntBASIC14.64□□□□□ -0.07
Col2a1P28481 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.64□□□□□ -0.07
Col2a1P28481 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col2a1P28481 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.64□□□□□ -0.07
Col2a1P28481 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.64□□□□□ -0.07
Col2a1P28481 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.64□□□□□ -0.07
Col2a1P28481 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col2a1P28481 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms