Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm18187-201ENSMUST00000196476 984 ntBASIC12.12□□□□□ -0.47
Cd40lgP27548 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Gm38671-201ENSMUST00000200573 130 ntBASIC12.12□□□□□ -0.47
Cd40lgP27548 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cd40lgP27548 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.12□□□□□ -0.47
Cd40lgP27548 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cd40lgP27548 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cd40lgP27548 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.11□□□□□ -0.47
Cd40lgP27548 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.11□□□□□ -0.47
Cd40lgP27548 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cd40lgP27548 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.11□□□□□ -0.47
Cd40lgP27548 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Gm15824-201ENSMUST00000119516 955 ntBASIC12.11□□□□□ -0.47
Cd40lgP27548 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Gm27486-201ENSMUST00000184923 80 ntBASIC12.11□□□□□ -0.47
Cd40lgP27548 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.11□□□□□ -0.47
Cd40lgP27548 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.11□□□□□ -0.47
Cd40lgP27548 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.11□□□□□ -0.47
Cd40lgP27548 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cd40lgP27548 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cd40lgP27548 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cd40lgP27548 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Gm13689-201ENSMUST00000119360 685 ntBASIC12.1□□□□□ -0.47
Cd40lgP27548 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.1□□□□□ -0.47
Cd40lgP27548 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cd40lgP27548 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cd40lgP27548 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.1□□□□□ -0.47
Cd40lgP27548 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.1□□□□□ -0.47
Cd40lgP27548 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.1□□□□□ -0.47
Cd40lgP27548 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.1□□□□□ -0.47
Cd40lgP27548 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.1□□□□□ -0.47
Cd40lgP27548 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms