Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.93□□□□□ -0.5
Cbx3P23198 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.93□□□□□ -0.5
Cbx3P23198 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.93□□□□□ -0.5
Cbx3P23198 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.93□□□□□ -0.5
Cbx3P23198 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cbx3P23198 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cbx3P23198 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Cbx3P23198 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cbx3P23198 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.92□□□□□ -0.5
Cbx3P23198 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.92□□□□□ -0.5
Cbx3P23198 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.92□□□□□ -0.5
Cbx3P23198 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.92□□□□□ -0.5
Cbx3P23198 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cbx3P23198 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cbx3P23198 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.92□□□□□ -0.5
Cbx3P23198 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.92□□□□□ -0.5
Cbx3P23198 Thap2-203ENSMUST00000218989 527 ntBASIC11.92□□□□□ -0.5
Cbx3P23198 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.92□□□□□ -0.5
Cbx3P23198 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.92□□□□□ -0.5
Cbx3P23198 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cbx3P23198 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cbx3P23198 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cbx3P23198 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.91□□□□□ -0.5
Cbx3P23198 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cbx3P23198 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cbx3P23198 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Cbx3P23198 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.91□□□□□ -0.5
Cbx3P23198 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.91□□□□□ -0.5
Cbx3P23198 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.91□□□□□ -0.5
Cbx3P23198 Gm16026-204ENSMUST00000162652 683 ntBASIC11.91□□□□□ -0.5
Cbx3P23198 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.91□□□□□ -0.5
Cbx3P23198 Mzt1-203ENSMUST00000227948 952 ntBASIC11.91□□□□□ -0.5
Cbx3P23198 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.91□□□□□ -0.5
Cbx3P23198 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Cbx3P23198 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cbx3P23198 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.91□□□□□ -0.5
Cbx3P23198 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cbx3P23198 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cbx3P23198 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cbx3P23198 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms