Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Hmgn1P18608 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
Hmgn1P18608 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Hmgn1P18608 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Pck2-205ENSMUST00000226352 2784 ntBASIC11.98□□□□□ -0.49
Hmgn1P18608 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hmgn1P18608 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hmgn1P18608 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Gm12485-201ENSMUST00000119641 291 ntBASIC11.98□□□□□ -0.49
Hmgn1P18608 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.98□□□□□ -0.49
Hmgn1P18608 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.98□□□□□ -0.49
Hmgn1P18608 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Gm27430-201ENSMUST00000184585 107 ntBASIC11.98□□□□□ -0.49
Hmgn1P18608 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.98□□□□□ -0.49
Hmgn1P18608 Gm44333-201ENSMUST00000197168 107 ntBASIC11.98□□□□□ -0.49
Hmgn1P18608 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.98□□□□□ -0.49
Hmgn1P18608 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.98□□□□□ -0.49
Hmgn1P18608 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hmgn1P18608 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Hmgn1P18608 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.98□□□□□ -0.49
Hmgn1P18608 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgn1P18608 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.97□□□□□ -0.49
Hmgn1P18608 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgn1P18608 AW822252-206ENSMUST00000208904 237 ntBASIC11.97□□□□□ -0.49
Hmgn1P18608 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC11.97□□□□□ -0.49
Hmgn1P18608 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.97□□□□□ -0.49
Hmgn1P18608 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgn1P18608 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Hmgn1P18608 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.96□□□□□ -0.49
Hmgn1P18608 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.96□□□□□ -0.49
Hmgn1P18608 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgn1P18608 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.96□□□□□ -0.49
Hmgn1P18608 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms