Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Ccl1P10146 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.14□□□□□ -0.79
Ccl1P10146 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl1P10146 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Ccl1P10146 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Ccl1P10146 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.13□□□□□ -0.79
Ccl1P10146 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.13□□□□□ -0.79
Ccl1P10146 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Ccl1P10146 Gm15770-201ENSMUST00000117498 584 ntBASIC10.13□□□□□ -0.79
Ccl1P10146 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.13□□□□□ -0.79
Ccl1P10146 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.13□□□□□ -0.79
Ccl1P10146 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.13□□□□□ -0.79
Ccl1P10146 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.13□□□□□ -0.79
Ccl1P10146 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.13□□□□□ -0.79
Ccl1P10146 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.13□□□□□ -0.79
Ccl1P10146 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Ccl1P10146 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Ccl1P10146 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Ccl1P10146 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccl1P10146 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccl1P10146 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccl1P10146 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccl1P10146 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Ccl1P10146 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccl1P10146 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.12□□□□□ -0.79
Ccl1P10146 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.12□□□□□ -0.79
Ccl1P10146 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.12□□□□□ -0.79
Ccl1P10146 Gm12350-201ENSMUST00000121208 462 ntBASIC10.12□□□□□ -0.79
Ccl1P10146 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.12□□□□□ -0.79
Ccl1P10146 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Gm44945-201ENSMUST00000206764 1187 ntBASIC10.12□□□□□ -0.79
Ccl1P10146 Gm18057-201ENSMUST00000208220 503 ntBASIC10.12□□□□□ -0.79
Ccl1P10146 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.12□□□□□ -0.79
Ccl1P10146 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC10.12□□□□□ -0.79
Ccl1P10146 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Ccl1P10146 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.12□□□□□ -0.79
Ccl1P10146 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Ccl1P10146 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Ccl1P10146 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Ccl1P10146 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms