Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.87■□□□□ 0.29
Hoxc9P09633 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hoxc9P09633 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc9P09633 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hoxc9P09633 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Gm2673-201ENSMUST00000120958 1608 ntBASIC16.86■□□□□ 0.29
Hoxc9P09633 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Gm26361-201ENSMUST00000158868 186 ntBASIC16.86■□□□□ 0.29
Hoxc9P09633 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Mir6979-201ENSMUST00000183927 56 ntBASIC16.86■□□□□ 0.29
Hoxc9P09633 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Hoxc9P09633 Gm45605-201ENSMUST00000210265 4269 ntBASIC16.86■□□□□ 0.29
Hoxc9P09633 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc9P09633 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Hoxc9P09633 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxc9P09633 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hoxc9P09633 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.85■□□□□ 0.29
Hoxc9P09633 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hoxc9P09633 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Hoxc9P09633 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxc9P09633 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxc9P09633 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.85■□□□□ 0.29
Hoxc9P09633 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.85■□□□□ 0.29
Hoxc9P09633 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.85■□□□□ 0.29
Hoxc9P09633 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxc9P09633 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc9P09633 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.84■□□□□ 0.29
Hoxc9P09633 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hoxc9P09633 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hoxc9P09633 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Hoxc9P09633 Gm12176-201ENSMUST00000121420 875 ntBASIC16.84■□□□□ 0.29
Hoxc9P09633 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Hoxc9P09633 Gm24845-201ENSMUST00000158034 109 ntBASIC16.84■□□□□ 0.29
Hoxc9P09633 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.84■□□□□ 0.29
Hoxc9P09633 Gm25732-201ENSMUST00000175168 60 ntBASIC16.84■□□□□ 0.29
Hoxc9P09633 Gm45224-201ENSMUST00000208203 414 ntBASIC16.84■□□□□ 0.29
Hoxc9P09633 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.84■□□□□ 0.29
Hoxc9P09633 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc9P09633 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.84■□□□□ 0.29
Hoxc9P09633 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Hoxc9P09633 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc9P09633 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc9P09633 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc9P09633 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Hoxc9P09633 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hoxc9P09633 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Hoxc9P09633 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hoxc9P09633 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms