Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sod1P08228 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sod1P08228 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.23□□□□□ -0.45
Sod1P08228 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sod1P08228 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.23□□□□□ -0.45
Sod1P08228 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Sod1P08228 Gm14277-201ENSMUST00000121195 360 ntBASIC12.23□□□□□ -0.45
Sod1P08228 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Gm26361-201ENSMUST00000158868 186 ntBASIC12.23□□□□□ -0.45
Sod1P08228 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.23□□□□□ -0.45
Sod1P08228 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.23□□□□□ -0.45
Sod1P08228 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.23□□□□□ -0.45
Sod1P08228 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sod1P08228 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sod1P08228 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.22□□□□□ -0.45
Sod1P08228 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Sod1P08228 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.22□□□□□ -0.45
Sod1P08228 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Sod1P08228 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Sod1P08228 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Sod1P08228 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.22□□□□□ -0.45
Sod1P08228 Gm12217-201ENSMUST00000118858 696 ntBASIC12.22□□□□□ -0.45
Sod1P08228 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.22□□□□□ -0.45
Sod1P08228 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Sod1P08228 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Gm25700-201ENSMUST00000177693 110 ntBASIC12.22□□□□□ -0.45
Sod1P08228 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.22□□□□□ -0.45
Sod1P08228 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.22□□□□□ -0.45
Sod1P08228 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.22□□□□□ -0.45
Sod1P08228 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Sod1P08228 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sod1P08228 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Sod1P08228 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.21□□□□□ -0.45
Sod1P08228 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.21□□□□□ -0.45
Sod1P08228 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sod1P08228 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sod1P08228 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.21□□□□□ -0.45
Sod1P08228 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.21□□□□□ -0.45
Sod1P08228 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.21□□□□□ -0.45
Sod1P08228 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Sod1P08228 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Sod1P08228 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.21□□□□□ -0.45
Sod1P08228 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Sod1P08228 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.21□□□□□ -0.45
Sod1P08228 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms